Gerbert

I am currently a sophomore majoring in Philosophy. Will it hurt me to have two smudges (D or F) in Calculus I and Biology I on my trancsript even though it won't count towards GPA? My school allows one to re-take 2 courses and it will erase the former grade, but it will still be on my transcript. All of my Philosophy, English, and humanities grades are great. But these 2 math/science grades are bad. Will this in anyway hurt my chances on getting into a graduate school? Thanks