As of late I've been looking around for internship opportunities, and as a result, I asked a professor (1/3 of the professors in my tiny program) if I could use her as a reference on a job application. Here is what she wrote:
Yes, my final paper for her class was a couple minutes late, and yes, I haven't been known for being the most timely individual (I have been a few minutes late handing in projects pretty consistently) and my first semester was kind of rocky. However, I maintained a 3.7 GPA this semester, which I would hope indicates I've at least been producing quality work. I think she is entirely justified in telling prospective employers about my lack of timeliness, though.
I suppose that my main concern here is that I don't see the point in continuing this program if I can't get references from my professors. I can see myself completing all the coursework with a high GPA, but if I won't be able to get an internship (I likely won't be able to get any references if the rest of the professors think the same way about me), then I won't be able to finish requirements for getting my MS.