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Masters in Computer Science | Help with profile | low GPA

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I wish to apply for MS for fall-16. My Detailed Profile is below: 
GRE – 316 (Quant 161, Verbal 155), AWA 3.0 
TOEFL Pending
Field for MS - Computer Science/Computer Engineering
Specialisation - Software Engineering

Work Exp :
Full Stack engineer at Sapient Consulting 2 years
- Backend development using Spring and Hibernate in Java
- Front-end development using AngularJS, HTML and CSS3

Design Engineer at Tripoto September 2015 - Present
- Design of new layouts using Sketch, Photoshop
- Front-end development using ReactJS and Javascript ES6

Papers :
Currently None.

Personal Projects : 
- Personalised feed fetching for Instagram (front-end in AngularJS and backend on NodeJS using Instagram api)

Undergrad Project
- Hostel Management System
- Threat analyser for a code in C

Academics :
- 10th - 81.6%
- 12th - 77.3%
The LNM Institute of Information Technology
- College CGPA – 5.62/10 {(Topper: 9.5/10)} 
- Junior/Senior GPA - 6.61/10

Left Defender for:
- Inter year football Tournament winning team
- Inter house football Tournament winning team
- Honourable Mention at the International Photography Awards 2015
- 1600 score at Hackthissite.org 
- Facebook Hacker Cup Qualifier 2011

Colleges :
1) State University of New York at Stony Brook 
2) University of Southern California 
3) University of California - Davis 
4) University of Florida 
5) Arizona State University (Arts, Media and Engineering concentration)
6) University of Illinois at Chicago 
7) University of Pittsburgh
8) San Jose State University
9) San Diego State University
10) Pennsylvania State University, University Park

- I do understand that my College GPA is very low, please suggest colleges that are not included in the list but have a good CS program and are likely to accept students with low GPA. I am looking for a program that allows taking up trans-disciplinary courses of arts and computer science.
- Also please suggest if extra curriculars have an impact.
- Any institutes which would allow for admission with Undergrad course re-evaluations?
Advices would be highly appreciated.

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