I kinda understand what you are talking about. I did research of Compbio in my undergrad (just application) and when i was looking at the programs I figured that the field is still being built. Knowing how to develop programs, create math models and theory will help in skill set and application because a lot of professors I have talked to are always developing new programs for their projects because the existing techniques are unavailable and the all around skills look better on the industry application.
Also, Is the MS terminal for you( since you want to get into industry) or are you looking to get a Ph.d after?