If you search the boards for Chicago MAPH, you'll come across some discussion on it. The basic impression I've gotten is that it's a cash cow for the university and some professors do not view the program favorably. That said, UC boasts that a huge percentage of MAPH students go onto PhD programs. Chicago is an incredible city, and while Hyde Park is a little isolated and surrounded by not so great areas, it's a beautiful campus and you'd have access to incredible resources.
I'm not familiar with Rutgers, but with its proximity to NYC, I'm sure they have plenty of connections with the museums there. Doesn't hurt to ask before you commit.
I'm currently attending grad school for Museum Studies. It's definitely not for those who want to be curators and I think any program would be honest about that. Most curatorial positions at large museums (even assistants nowadays, heck, even some internships I've seen) are requiring at least a MA in a specialized field and proficiency in at least one foreign language. Smaller museums (and typically non-art) will accept a variety of related, advanced degrees, but these positions usually require you to have significant museum experience.
While I did not look at UW's program, I will say most Museum Studies programs are very generalized. Now if you had applied to joint programs for Art History/Museum Studies, then that would be different and I think would be comparable to other Art History programs. I believe UW-Madison may have a program like this and I know UDenver has an MA in Anthropology with a concentration in Museum Studies.